Charcoal summary report for genome GCF_002154655.1_genomic.fna.gz

Genome lineage: d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales

estimated clean / contaminated bp at each taxonomic rank

• superkingdom: good 2.6 Mbp / bad 0 bp
• phylum: good 2.6 Mbp / bad 227 bp
• class: good 182.6 kb / bad 2.4 Mbp
• order: good 182.6 kb / bad 2.4 Mbp
• family: good 182.6 kb / bad 2.4 Mbp
• genus: good 182.6 kb / bad 2.4 Mbp

Of the total 2.6 Mbp in the genome file, 16.0 kb could not be identified with the database used, and 94.9 kb was ignored by sourmash due to the scaled/ksize values used.

How clean and dirty content changes by taxon

Taxonomic assignments across ranks