Charcoal summary report for genome `GCF_001683825.1_genomic.fna.gz`¶

Genome lineage: d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales

estimated clean / contaminated bp at each taxonomic rank¶

superkingdom: good 4.1 Mbp / bad 0 bp
phylum: good 3.9 Mbp / bad 200.0 kb
class: good 3.9 Mbp / bad 200.0 kb
order: good 3.9 Mbp / bad 200.0 kb
family: good 3.9 Mbp / bad 243.3 kb
genus: good 3.9 Mbp / bad 243.3 kb

Of the total 4.1 Mbp in the genome file, 2.8 Mbp could not be identified with the database used, and 6.8 kb was ignored by sourmash due to the scaled/ksize values used.

Charcoal summary report for genome `GCF_001683825.1_genomic.fna.gz`¶

estimated clean / contaminated bp at each taxonomic rank¶

How clean and dirty content changes by taxon¶

Taxonomic assignments across ranks¶

Charcoal summary report for genome GCF_001683825.1_genomic.fna.gz¶

estimated clean / contaminated bp at each taxonomic rank¶

How clean and dirty content changes by taxon¶

Taxonomic assignments across ranks¶

Charcoal summary report for genome `GCF_001683825.1_genomic.fna.gz`¶