GCF_001408335.1_genomic.fna.gz¶filtering dirty alignments to query size >= 500 and identity >= 95%
dirty bases: 586.4kb of alignments to query genome, across all targets.
filtering clean alignments to query size >= 500 and identity >= 95%
clean bases: 0.0kb of alignments to query genome, across all targets.
filtering dirty alignments to query size >= 500 and identity >= 95%
filtering dirty alignments to min query coverage 50%
dirty bases: 346.1kb of alignments to query genome, across all targets.
removing 490kb total in contigs >= 50% dirty, based on alignments at 95% identity over 0.5kb or more
no alignments to clean genomes to show!
showing 74 dirty alignments total.
dirty bases: 346.1kb of alignments to query genome, across all targets.
contig name NZ_CZJU01000043.1, total size 5kb, of which 5kb (100%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000022.1 at 97.1% identity
NZ_CZJU01000043.1[0:4999] to database NZ_BJNW01000022.1[27341:22342]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000022.1 at 97.1% identity
NZ_CZJU01000043.1[373:5372] to database NZ_BJNW01000022.1[27341:22342]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000044.1, total size 5kb, of which 5kb (100%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000033.1 at 98.0% identity
NZ_CZJU01000044.1[0:5413] to database NZ_BJNW01000033.1[5066:33]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 97.2% identity
NZ_CZJU01000044.1[0:5413] to database NC_010617.1[1747859:1754334]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_000786655.1, contig NZ_JROM01000028.1 at 95.2% identity
NZ_CZJU01000044.1[0:4999] to database NZ_JROM01000028.1[5360:361]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_000786655.1, contig NZ_JROM01000028.1 at 95.7% identity
NZ_CZJU01000044.1[414:5413] to database NZ_JROM01000028.1[5360:361]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000116.1 at 98.2% identity
NZ_CZJU01000044.1[0:4999] to database NZ_RCOM01000116.1[4999:0]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000116.1 at 97.9% identity
NZ_CZJU01000044.1[414:5413] to database NZ_RCOM01000116.1[4999:0]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003687455.1, contig NZ_PHOA01000099.1 at 96.1% identity
NZ_CZJU01000044.1[0:5413] to database NZ_PHOA01000099.1[5007:4]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000088.1, total size 7kb, of which 7kb (100%) aligns to other genomes with a taxonomic mismatch.
7kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000005.1 at 95.7% identity
NZ_CZJU01000088.1[0:6524] to database NZ_BJNW01000005.1[101207:106206]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000095.1, total size 10kb, of which 5kb (51%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000011.1 at 95.7% identity
NZ_CZJU01000095.1[0:4999] to database NZ_BJNW01000011.1[40079:45078]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000124.1, total size 21kb, of which 16kb (76%) aligns to other genomes with a taxonomic mismatch.
16kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000022.1 at 99.3% identity
NZ_CZJU01000124.1[5000:21098] to database NZ_BJNW01000022.1[4286:20437]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000139.1, total size 36kb, of which 26kb (72%) aligns to other genomes with a taxonomic mismatch.
10kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000023.1 at 95.2% identity
NZ_CZJU01000139.1[15000:24999] to database NZ_BJNW01000023.1[20679:10808]c__Actinobacteria, database lineage c__Actinomycetia6kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 96.6% identity
NZ_CZJU01000139.1[30000:36372] to database NC_010617.1[2631406:2625907]c__Actinobacteria, database lineage c__Actinomycetia10kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 97.5% identity
NZ_CZJU01000139.1[15000:24999] to database NC_010617.1[2652736:2642325]c__Actinobacteria, database lineage c__Actinomycetia10kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 96.0% identity
NZ_CZJU01000139.1[0:9999] to database NC_010617.1[2659184:2651047]c__Actinobacteria, database lineage c__Actinomycetia6kb aligns to genome GCF_003226895.2, contig NZ_PNJG02000002.1 at 96.1% identity
NZ_CZJU01000139.1[30000:36372] to database NZ_PNJG02000002.1[532325:538216]c__Actinobacteria, database lineage c__Actinomycetia10kb aligns to genome GCF_900177335.1, contig NZ_FXAC01000008.1 at 95.2% identity
NZ_CZJU01000139.1[15000:24999] to database NZ_FXAC01000008.1[127475:117449]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_900177335.1, contig NZ_FXAC01000008.1 at 96.2% identity
NZ_CZJU01000139.1[0:4999] to database NZ_FXAC01000008.1[134667:129668]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003687455.1, contig NZ_PHOA01000139.1 at 95.2% identity
NZ_CZJU01000139.1[20000:24999] to database NZ_PHOA01000139.1[4543:0]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000143.1, total size 76kb, of which 61kb (80%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000001.1 at 95.7% identity
NZ_CZJU01000143.1[70000:74999] to database NZ_BJNW01000001.1[128030:123031]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000001.1 at 95.2% identity
NZ_CZJU01000143.1[70996:75995] to database NZ_BJNW01000001.1[128030:123031]c__Actinobacteria, database lineage c__Actinomycetia15kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000001.1 at 95.8% identity
NZ_CZJU01000143.1[50000:64998] to database NZ_BJNW01000001.1[148797:133552]c__Actinobacteria, database lineage c__Actinomycetia15kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000001.1 at 95.6% identity
NZ_CZJU01000143.1[30000:44999] to database NZ_BJNW01000001.1[168176:153879]c__Actinobacteria, database lineage c__Actinomycetia15kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000001.1 at 97.5% identity
NZ_CZJU01000143.1[5000:19999] to database NZ_BJNW01000001.1[191560:176651]c__Actinobacteria, database lineage c__Actinomycetia10kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 95.1% identity
NZ_CZJU01000143.1[15000:24999] to database NC_010617.1[656390:665795]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 96.8% identity
NZ_CZJU01000143.1[35000:39999] to database NC_010617.1[674841:679840]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 95.7% identity
NZ_CZJU01000143.1[60000:64998] to database NC_010617.1[697778:702777]c__Actinobacteria, database lineage c__Actinomycetia20kb aligns to genome GCF_003226895.2, contig NZ_PNJG02000001.1 at 95.4% identity
NZ_CZJU01000143.1[30000:49999] to database NZ_PNJG02000001.1[1092865:1074817]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003226895.2, contig NZ_PNJG02000001.1 at 96.8% identity
NZ_CZJU01000143.1[15000:19999] to database NZ_PNJG02000001.1[1098871:1093872]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_000786655.1, contig NZ_JROM01000007.1 at 95.7% identity
NZ_CZJU01000143.1[45000:49999] to database NZ_JROM01000007.1[50687:45688]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_000786655.1, contig NZ_JROM01000007.1 at 96.8% identity
NZ_CZJU01000143.1[15000:19999] to database NZ_JROM01000007.1[79225:74226]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_900177335.1, contig NZ_FXAC01000004.1 at 96.8% identity
NZ_CZJU01000143.1[15000:19999] to database NZ_FXAC01000004.1[21525:26524]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_900177335.1, contig NZ_FXAC01000004.1 at 97.0% identity
NZ_CZJU01000143.1[45000:49999] to database NZ_FXAC01000004.1[49651:54650]c__Actinobacteria, database lineage c__Actinomycetia10kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000013.1 at 95.9% identity
NZ_CZJU01000143.1[30000:39999] to database NZ_RCOM01000013.1[16918:26795]c__Actinobacteria, database lineage c__Actinomycetia20kb aligns to genome GCF_003687455.1, contig NZ_PHOA01000005.1 at 95.1% identity
NZ_CZJU01000143.1[30000:49999] to database NZ_PHOA01000005.1[15598:33057]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000146.1, total size 19kb, of which 10kb (52%) aligns to other genomes with a taxonomic mismatch.
10kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000002.1 at 95.8% identity
NZ_CZJU01000146.1[0:9999] to database NZ_BJNW01000002.1[67678:57895]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003226895.2, contig NZ_PNJG02000002.1 at 96.8% identity
NZ_CZJU01000146.1[5000:9999] to database NZ_PNJG02000002.1[104960:99961]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000059.1 at 96.8% identity
NZ_CZJU01000146.1[5000:9999] to database NZ_RCOM01000059.1[5971:10970]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000150.1, total size 19kb, of which 10kb (54%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000001.1 at 95.2% identity
NZ_CZJU01000150.1[13512:18511] to database NZ_BJNW01000001.1[210520:205521]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 98.9% identity
NZ_CZJU01000150.1[0:4999] to database NC_010617.1[615600:620599]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000171.1, total size 7kb, of which 5kb (71%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000014.1 at 95.2% identity
NZ_CZJU01000171.1[0:4999] to database NZ_BJNW01000014.1[34084:39083]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000177.1, total size 9kb, of which 5kb (53%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_006539885.1, contig NZ_BJNW01000001.1 at 95.2% identity
NZ_CZJU01000177.1[4497:9496] to database NZ_BJNW01000001.1[201305:196306]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000042.1, total size 5kb, of which 5kb (100%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 95.3% identity
NZ_CZJU01000042.1[0:5329] to database NC_010617.1[1970357:1975356]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003226895.2, contig NZ_PNJG02000003.1 at 97.5% identity
NZ_CZJU01000042.1[0:4999] to database NZ_PNJG02000003.1[165178:160179]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003226895.2, contig NZ_PNJG02000003.1 at 96.8% identity
NZ_CZJU01000042.1[330:5329] to database NZ_PNJG02000003.1[165493:160494]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000066.1, total size 24kb, of which 14kb (58%) aligns to other genomes with a taxonomic mismatch.
9kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 96.2% identity
NZ_CZJU01000066.1[15000:23803] to database NC_010617.1[241932:249930]c__Actinobacteria, database lineage c__Actinomycetia14kb aligns to genome GCF_003226895.2, contig NZ_PNJG02000002.1 at 96.3% identity
NZ_CZJU01000066.1[10000:23803] to database NZ_PNJG02000002.1[211699:197925]c__Actinobacteria, database lineage c__Actinomycetia9kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000054.1 at 96.2% identity
NZ_CZJU01000066.1[15000:23803] to database NZ_RCOM01000054.1[8213:300]c__Actinobacteria, database lineage c__Actinomycetia9kb aligns to genome GCF_003687455.1, contig NZ_PHOA01000032.1 at 96.9% identity
NZ_CZJU01000066.1[15000:23803] to database NZ_PHOA01000032.1[7606:0]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000085.1, total size 34kb, of which 34kb (100%) aligns to other genomes with a taxonomic mismatch.
34kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 98.1% identity
NZ_CZJU01000085.1[0:33708] to database NC_010617.1[2576696:2542503]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000002.1 at 95.2% identity
NZ_CZJU01000085.1[15000:19999] to database NZ_RCOM01000002.1[67214:72213]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000087.1, total size 12kb, of which 12kb (100%) aligns to other genomes with a taxonomic mismatch.
12kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 98.2% identity
NZ_CZJU01000087.1[0:11665] to database NC_010617.1[2538176:2526907]c__Actinobacteria, database lineage c__Actinomycetia12kb aligns to genome GCF_003226895.2, contig NZ_PNJG02000002.1 at 97.4% identity
NZ_CZJU01000087.1[0:11665] to database NZ_PNJG02000002.1[617620:627561]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000002.1 at 96.2% identity
NZ_CZJU01000087.1[0:4999] to database NZ_RCOM01000002.1[86184:91183]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000103.1, total size 29kb, of which 15kb (51%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 96.5% identity
NZ_CZJU01000103.1[0:4999] to database NC_010617.1[146174:151173]c__Actinobacteria, database lineage c__Actinomycetia10kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 97.3% identity
NZ_CZJU01000103.1[10000:19999] to database NC_010617.1[157747:167296]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000104.1, total size 31kb, of which 16kb (52%) aligns to other genomes with a taxonomic mismatch.
10kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 96.7% identity
NZ_CZJU01000104.1[15000:24999] to database NC_010617.1[2297242:2287518]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000005.1 at 95.7% identity
NZ_CZJU01000104.1[25000:29999] to database NZ_RCOM01000005.1[28744:23745]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000005.1 at 95.2% identity
NZ_CZJU01000104.1[26491:31490] to database NZ_RCOM01000005.1[28744:23745]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000148.1, total size 9kb, of which 5kb (56%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 95.2% identity
NZ_CZJU01000148.1[0:4999] to database NC_010617.1[138278:133279]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000029.1 at 95.2% identity
NZ_CZJU01000148.1[0:4999] to database NZ_RCOM01000029.1[15865:10866]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000155.1, total size 17kb, of which 10kb (57%) aligns to other genomes with a taxonomic mismatch.
10kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 96.3% identity
NZ_CZJU01000155.1[0:9999] to database NC_010617.1[112844:121680]c__Actinobacteria, database lineage c__Actinomycetia5kb aligns to genome GCF_003687455.1, contig NZ_PHOA01000007.1 at 96.2% identity
NZ_CZJU01000155.1[0:4999] to database NZ_PHOA01000007.1[7959:2960]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000159.1, total size 17kb, of which 12kb (70%) aligns to other genomes with a taxonomic mismatch.
12kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 95.6% identity
NZ_CZJU01000159.1[5000:16937] to database NC_010617.1[2438554:2448019]c__Actinobacteria, database lineage c__Actinomycetia7kb aligns to genome GCF_003687455.1, contig NZ_PHOA01000040.1 at 96.8% identity
NZ_CZJU01000159.1[10000:16937] to database NZ_PHOA01000040.1[9770:4322]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000163.1, total size 16kb, of which 16kb (100%) aligns to other genomes with a taxonomic mismatch.
16kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 95.4% identity
NZ_CZJU01000163.1[0:16140] to database NC_010617.1[869139:848708]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000167.1, total size 11kb, of which 6kb (55%) aligns to other genomes with a taxonomic mismatch.
6kb aligns to genome GCF_000010285.1, contig NC_010617.1 at 99.8% identity
NZ_CZJU01000167.1[5000:11091] to database NC_010617.1[1888798:1882528]c__Actinobacteria, database lineage c__Actinomycetia6kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000071.1 at 97.7% identity
NZ_CZJU01000167.1[5000:11091] to database NZ_RCOM01000071.1[6347:11742]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000118.1, total size 15kb, of which 10kb (66%) aligns to other genomes with a taxonomic mismatch.
10kb aligns to genome GCF_900111365.1, contig NZ_FOGZ01000015.1 at 96.5% identity
NZ_CZJU01000118.1[5000:14578] to database NZ_FOGZ01000015.1[28475:36059]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000077.1, total size 24kb, of which 15kb (63%) aligns to other genomes with a taxonomic mismatch.
15kb aligns to genome GCF_000178455.1, contig NZ_ADNU01000064.1 at 96.4% identity
NZ_CZJU01000077.1[0:14999] to database NZ_ADNU01000064.1[11095:976]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000115.1, total size 7kb, of which 5kb (67%) aligns to other genomes with a taxonomic mismatch.
5kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000080.1 at 95.2% identity
NZ_CZJU01000115.1[0:4999] to database NZ_RCOM01000080.1[5401:402]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000157.1, total size 17kb, of which 10kb (58%) aligns to other genomes with a taxonomic mismatch.
10kb aligns to genome GCF_003667225.1, contig NZ_RCOM01000002.1 at 95.2% identity
NZ_CZJU01000157.1[5000:14999] to database NZ_RCOM01000002.1[45228:37354]c__Actinobacteria, database lineage c__Actinomycetiacontig name NZ_CZJU01000047.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.
6kb aligns to genome GCF_900163655.1, contig NZ_FWFG01000013.1 at 97.1% identity
NZ_CZJU01000047.1[0:5582] to database NZ_FWFG01000013.1[65967:70966]c__Actinobacteria, database lineage c__Actinomycetia