Charcoal summary report for genome `GCF_001078575.1_genomic.fna.gz`¶

Genome lineage: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales

estimated clean / contaminated bp at each taxonomic rank¶

superkingdom: good 5.9 Mbp / bad 0 bp
phylum: good 5.9 Mbp / bad 0 bp
class: good 5.9 Mbp / bad 0 bp
order: good 5.9 Mbp / bad 2.8 kb
family: good 45.0 kb / bad 5.9 Mbp
genus: good 45.0 kb / bad 5.9 Mbp

Of the total 5.9 Mbp in the genome file, 8.9 kb could not be identified with the database used, and 8.4 kb was ignored by sourmash due to the scaled/ksize values used.

Charcoal summary report for genome `GCF_001078575.1_genomic.fna.gz`¶

estimated clean / contaminated bp at each taxonomic rank¶

How clean and dirty content changes by taxon¶

Taxonomic assignments across ranks¶

Charcoal summary report for genome GCF_001078575.1_genomic.fna.gz¶

estimated clean / contaminated bp at each taxonomic rank¶

How clean and dirty content changes by taxon¶

Taxonomic assignments across ranks¶

Charcoal summary report for genome `GCF_001078575.1_genomic.fna.gz`¶