Charcoal alignment report for genome GCA_003222275.1_genomic.fna.gz

filtering dirty alignments to query size >= 500 and identity >= 95%

dirty bases: 346.9kb of alignments to query genome, across all targets.

filtering clean alignments to query size >= 500 and identity >= 95%

clean bases: 0.0kb of alignments to query genome, across all targets.

filtering dirty alignments to query size >= 500 and identity >= 95%

filtering dirty alignments to min query coverage 50%

dirty bases: 321.9kb of alignments to query genome, across all targets.

removing 351kb total in contigs >= 50% dirty, based on alignments at 95% identity over 0.5kb or more

Alignment views

no alignments to clean genomes to show!

showing 47 dirty alignments total.

Contig alignment report

dirty bases: 321.9kb of alignments to query genome, across all targets.

contig name QHVJ01000003.1, total size 16kb, of which 11kb (68%) aligns to other genomes with a taxonomic mismatch.

• 11kb aligns to genome GCA_003220225.1, contig QHRU01000043.1 at 99.0% identity

  • alignment from query QHVJ01000003.1[5000:15793] to database QHRU01000043.1[27103:38854]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000436.1, total size 5kb, of which 5kb (100%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000013.1 at 95.7% identity

  • alignment from query QHVJ01000436.1[0:4999] to database QHRU01000013.1[5127:128]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000013.1 at 95.7% identity

  • alignment from query QHVJ01000436.1[361:5360] to database QHRU01000013.1[5127:128]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000439.1, total size 7kb, of which 7kb (100%) aligns to other genomes with a taxonomic mismatch.

• 7kb aligns to genome GCA_003220225.1, contig QHRU01000034.1 at 97.9% identity

  • alignment from query QHVJ01000439.1[0:7034] to database QHRU01000034.1[83846:89505]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000445.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000035.1 at 100.0% identity

  • alignment from query QHVJ01000445.1[0:4999] to database QHRU01000035.1[254094:249095]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000035.1 at 99.6% identity

  • alignment from query QHVJ01000445.1[565:5564] to database QHRU01000035.1[254094:249095]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000446.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000075.1 at 100.0% identity

  • alignment from query QHVJ01000446.1[0:5508] to database QHRU01000075.1[5930:10929]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000470.1, total size 8kb, of which 8kb (100%) aligns to other genomes with a taxonomic mismatch.

• 8kb aligns to genome GCA_003220225.1, contig QHRU01000039.1 at 99.2% identity

  • alignment from query QHVJ01000470.1[0:7824] to database QHRU01000039.1[107027:114309]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000456.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000088.1 at 99.2% identity

  • alignment from query QHVJ01000456.1[0:6455] to database QHRU01000088.1[5882:11864]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000499.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000059.1 at 98.0% identity

  • alignment from query QHVJ01000499.1[0:4999] to database QHRU01000059.1[22602:17603]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000059.1 at 97.0% identity

  • alignment from query QHVJ01000499.1[828:5827] to database QHRU01000059.1[22602:17603]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000521.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000050.1 at 99.8% identity

  • alignment from query QHVJ01000521.1[0:6363] to database QHRU01000050.1[52341:46633]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000158.1, total size 26kb, of which 26kb (100%) aligns to other genomes with a taxonomic mismatch.

• 26kb aligns to genome GCA_003220225.1, contig QHRU01000033.1 at 99.4% identity

  • alignment from query QHVJ01000158.1[0:25538] to database QHRU01000033.1[105864:130699]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000160.1, total size 17kb, of which 12kb (70%) aligns to other genomes with a taxonomic mismatch.

• 12kb aligns to genome GCA_003220225.1, contig QHRU01000055.1 at 96.6% identity

  • alignment from query QHVJ01000160.1[5000:16637] to database QHRU01000055.1[24601:13261]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000553.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000074.1 at 99.7% identity

  • alignment from query QHVJ01000553.1[0:6238] to database QHRU01000074.1[32919:27393]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000554.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000040.1 at 99.1% identity

  • alignment from query QHVJ01000554.1[0:5821] to database QHRU01000040.1[5633:10632]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000235.1, total size 13kb, of which 13kb (100%) aligns to other genomes with a taxonomic mismatch.

• 13kb aligns to genome GCA_003220225.1, contig QHRU01000060.1 at 99.8% identity

  • alignment from query QHVJ01000235.1[0:12577] to database QHRU01000060.1[47758:61041]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000092.1, total size 10kb, of which 10kb (100%) aligns to other genomes with a taxonomic mismatch.

• 10kb aligns to genome GCA_003220225.1, contig QHRU01000079.1 at 98.5% identity

  • alignment from query QHVJ01000092.1[0:9696] to database QHRU01000079.1[6125:15776]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000266.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000151.1 at 100.0% identity

  • alignment from query QHVJ01000266.1[0:6466] to database QHRU01000151.1[10389:16699]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000304.1, total size 7kb, of which 7kb (100%) aligns to other genomes with a taxonomic mismatch.

• 7kb aligns to genome GCA_003220225.1, contig QHRU01000059.1 at 97.4% identity

  • alignment from query QHVJ01000304.1[0:7040] to database QHRU01000059.1[75788:68584]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000311.1, total size 10kb, of which 10kb (100%) aligns to other genomes with a taxonomic mismatch.

• 10kb aligns to genome GCA_003220225.1, contig QHRU01000041.1 at 98.0% identity

  • alignment from query QHVJ01000311.1[0:9788] to database QHRU01000041.1[87117:78292]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000286.1, total size 7kb, of which 7kb (100%) aligns to other genomes with a taxonomic mismatch.

• 7kb aligns to genome GCA_003220225.1, contig QHRU01000059.1 at 99.1% identity

  • alignment from query QHVJ01000286.1[0:6806] to database QHRU01000059.1[62748:69143]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000296.1, total size 7kb, of which 7kb (100%) aligns to other genomes with a taxonomic mismatch.

• 7kb aligns to genome GCA_003220225.1, contig QHRU01000015.1 at 99.1% identity

  • alignment from query QHVJ01000296.1[0:6998] to database QHRU01000015.1[12465:18906]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000339.1, total size 8kb, of which 8kb (100%) aligns to other genomes with a taxonomic mismatch.

• 8kb aligns to genome GCA_003220225.1, contig QHRU01000019.1 at 96.8% identity

  • alignment from query QHVJ01000339.1[0:8364] to database QHRU01000019.1[16572:11476]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000341.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000057.1 at 99.2% identity

  • alignment from query QHVJ01000341.1[0:6294] to database QHRU01000057.1[8432:2443]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000332.1, total size 8kb, of which 8kb (100%) aligns to other genomes with a taxonomic mismatch.

• 8kb aligns to genome GCA_003220225.1, contig QHRU01000059.1 at 98.6% identity

  • alignment from query QHVJ01000332.1[0:7978] to database QHRU01000059.1[79656:87735]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000287.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000109.1 at 97.0% identity

  • alignment from query QHVJ01000287.1[0:6490] to database QHRU01000109.1[33793:38792]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000338.1, total size 8kb, of which 8kb (100%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000011.1 at 98.4% identity

  • alignment from query QHVJ01000338.1[0:4999] to database QHRU01000011.1[8612:3613]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

• 5kb aligns to genome GCA_005879795.1, contig VBKJ01000223.1 at 100.0% identity

  • alignment from query QHVJ01000338.1[3453:8452] to database VBKJ01000223.1[4999:0]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Desulfobacterota_B

contig name QHVJ01000335.1, total size 5kb, of which 5kb (100%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000142.1 at 97.0% identity

  • alignment from query QHVJ01000335.1[0:5357] to database QHRU01000142.1[28:5027]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000366.1, total size 5kb, of which 5kb (100%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000039.1 at 98.0% identity

  • alignment from query QHVJ01000366.1[0:5073] to database QHRU01000039.1[72661:77660]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000347.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000027.1 at 96.6% identity

  • alignment from query QHVJ01000347.1[0:5552] to database QHRU01000027.1[0:3644]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000373.1, total size 7kb, of which 7kb (100%) aligns to other genomes with a taxonomic mismatch.

• 7kb aligns to genome GCA_003220225.1, contig QHRU01000050.1 at 99.2% identity

  • alignment from query QHVJ01000373.1[0:7334] to database QHRU01000050.1[68343:74889]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000382.1, total size 8kb, of which 8kb (100%) aligns to other genomes with a taxonomic mismatch.

• 8kb aligns to genome GCA_003220225.1, contig QHRU01000016.1 at 97.5% identity

  • alignment from query QHVJ01000382.1[0:8262] to database QHRU01000016.1[3938:10416]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000383.1, total size 9kb, of which 5kb (56%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000047.1 at 97.8% identity

  • alignment from query QHVJ01000383.1[3903:8902] to database QHRU01000047.1[0:4999]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000223.1, total size 17kb, of which 12kb (70%) aligns to other genomes with a taxonomic mismatch.

• 12kb aligns to genome GCA_003220225.1, contig QHRU01000075.1 at 99.1% identity

  • alignment from query QHVJ01000223.1[5000:16833] to database QHRU01000075.1[62799:52944]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000385.1, total size 10kb, of which 5kb (51%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_003220225.1, contig QHRU01000142.1 at 96.2% identity

  • alignment from query QHVJ01000385.1[0:4999] to database QHRU01000142.1[12798:17797]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000398.1, total size 9kb, of which 9kb (100%) aligns to other genomes with a taxonomic mismatch.

• 9kb aligns to genome GCA_003220225.1, contig QHRU01000041.1 at 99.4% identity

  • alignment from query QHVJ01000398.1[0:9211] to database QHRU01000041.1[101638:110572]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000394.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000039.1 at 97.6% identity

  • alignment from query QHVJ01000394.1[0:5941] to database QHRU01000039.1[97659:91703]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000418.1, total size 8kb, of which 8kb (100%) aligns to other genomes with a taxonomic mismatch.

• 8kb aligns to genome GCA_003220225.1, contig QHRU01000057.1 at 98.9% identity

  • alignment from query QHVJ01000418.1[0:8265] to database QHRU01000057.1[57194:65351]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000414.1, total size 7kb, of which 7kb (100%) aligns to other genomes with a taxonomic mismatch.

• 7kb aligns to genome GCA_003220225.1, contig QHRU01000055.1 at 99.8% identity

  • alignment from query QHVJ01000414.1[0:7250] to database QHRU01000055.1[68709:76106]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000423.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000065.1 at 95.3% identity

  • alignment from query QHVJ01000423.1[0:6127] to database QHRU01000065.1[40616:34332]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000426.1, total size 6kb, of which 6kb (100%) aligns to other genomes with a taxonomic mismatch.

• 6kb aligns to genome GCA_003220225.1, contig QHRU01000079.1 at 99.8% identity

  • alignment from query QHVJ01000426.1[0:5955] to database QHRU01000079.1[29686:23687]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Methylomirabilota

contig name QHVJ01000130.1, total size 13kb, of which 8kb (62%) aligns to other genomes with a taxonomic mismatch.

• 8kb aligns to genome GCA_003225335.1, contig QHZE01000052.1 at 97.0% identity

  • alignment from query QHVJ01000130.1[5000:13177] to database QHZE01000052.1[2412:8935]
  • disagreement at rank 'class'; query lineage c__Vicinamibacteria, database lineage c__UBA6911

contig name QHVJ01000333.1, total size 5kb, of which 5kb (100%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_003225335.1, contig QHZE01000052.1 at 97.5% identity

  • alignment from query QHVJ01000333.1[0:5331] to database QHZE01000052.1[0:4999]
  • disagreement at rank 'class'; query lineage c__Vicinamibacteria, database lineage c__UBA6911

contig name QHVJ01000346.1, total size 5kb, of which 5kb (100%) aligns to other genomes with a taxonomic mismatch.

• 5kb aligns to genome GCA_005879795.1, contig VBKJ01000017.1 at 99.4% identity

  • alignment from query QHVJ01000346.1[0:4999] to database VBKJ01000017.1[4344:0]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Desulfobacterota_B

• 5kb aligns to genome GCA_005879795.1, contig VBKJ01000017.1 at 98.6% identity

  • alignment from query QHVJ01000346.1[296:5295] to database VBKJ01000017.1[4344:0]
  • disagreement at rank 'phylum'; query lineage p__Acidobacteriota, database lineage p__Desulfobacterota_B