Charcoal summary report for genome `GCA_003221985.1_genomic.fna.gz`¶

Genome lineage: d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales

estimated clean / contaminated bp at each taxonomic rank¶

superkingdom: good 3.0 Mbp / bad 0 bp
phylum: good 2.9 Mbp / bad 131.2 kb
class: good 2.9 Mbp / bad 131.2 kb
order: good 2.9 Mbp / bad 131.2 kb
family: good 2.4 Mbp / bad 582.4 kb
genus: good 2.4 Mbp / bad 582.4 kb

Of the total 3.0 Mbp in the genome file, 1407.3 kb could not be identified with the database used, and 10.4 kb was ignored by sourmash due to the scaled/ksize values used.

Charcoal summary report for genome `GCA_003221985.1_genomic.fna.gz`¶

estimated clean / contaminated bp at each taxonomic rank¶

How clean and dirty content changes by taxon¶

Taxonomic assignments across ranks¶

Charcoal summary report for genome GCA_003221985.1_genomic.fna.gz¶

estimated clean / contaminated bp at each taxonomic rank¶

How clean and dirty content changes by taxon¶

Taxonomic assignments across ranks¶

Charcoal summary report for genome `GCA_003221985.1_genomic.fna.gz`¶